Hacker News with Generative AI: Microbiology

Microbe that infests hospitals can digest medical-grade plastic ― a first (nature.com)
A strain of bacterium that often causes infections in hospital can break down plastic, research published this week in Cell Reports reveals1.
Mass spectrometry method identifies pathogens within minutes instead of days (phys.org)
Researchers at the Technical University of Munich (TUM) and Imperial College London have developed a new method to identify bacteria with unprecedented speed.
New species of methane-producing archaea discovered in the human gut (phys.org)
An international team of microbiologists from the Medical University of Graz, the DSMZ—German Collection of Microorganisms and Cell Cultures (Braunschweig, Germany)—and the University of Illinois (U.S.) has identified and described a previously unknown species of methane-producing archaea in the human gut: Methanobrevibacter intestini sp. nov. (strain WWM1085).
How a Biofilm’s Strange Shape Emerges From Cellular Geometry (quantamagazine.org)
Biofilms lead lives of liminality. Just a few cells thick, these layered communities of microbes anchor themselves to solid surfaces at interfaces — where rocks meet salt water in tide pools, between plants and dirt in root systems, or on the saliva-covered surface of your teeth. Amalgamations of single cells, biofilms grow and develop into unified life forms that can split back into their component cells under duress. Biofilms, then, are somehow both unicellular and multicellular — and simultaneously neither.
Scientists discover new microbes in Earth's deep soil (phys.org)
Scientists have discovered a new phylum of microbes in Earth's Critical Zone, an area of deep soil that restores water quality.
The Animals That Exist Between Life and Death (nautil.us)
At the dawn of microbiology, scientists glimpsed unseen worlds and stumbled into a philosophical purgatory
Molecular clock: bacteria used oxygen long before widespread photosynthesis (phys.org)
Molecular clock analysis shows bacteria used oxygen long before widespread photosynthesis
Unique bacteria that survive by employing multicellular behavior (phys.org)
In a recent study, researchers gained new insight into the lives of bacteria that survive by grouping together as if they were a multicellular organism.
Some gut bacteria could make certain drugs less effective, study indicates (phys.org)
A study published in Nature Chemistry by researchers from the University of Pittsburgh and Yale University shows how common gut bacteria can metabolize certain oral medications that target cellular receptors called GPCRs, potentially rendering these important drugs less effective.
Microbes can capture carbon and degrade plastic – why aren't we using them more? (nature.com)
Microorganisms have shaped Earth for almost four billion years.
Desert rocks suggest unknown microorganism uses marble and limestone as a home (phys.org)
In the desert areas of Namibia, Oman, and Saudi Arabia, research work has revealed unusual structures that are probably due to the activity of an unknown microbiological life form.
Unknown microorganisms used marble and limestone as a habitat (sciencedaily.com)
In the desert areas of Namibia, Oman, and Saudi Arabia, research work has revealed unusual structures that are probably due to the activity of an unknown microbiological life form.
Microplastics boost antibiotic resistance in E. coli, lab study suggests (thenewlede.org)
Co-mingling of tiny pieces of plastic with certain harmful bacteria can make the bacteria harder to fight with several common antibiotics, according to a new study that adds to global concerns about antibiotic resistance.
Carbon recyclers: Sulfur bacteria break down organic substances in seabed (phys.org)
Sulfate-reducing bacteria break down a large proportion of the organic carbon in the oxygen-free zones of Earth, and in the seabed in particular.
Chimeric particles expand species boundaries in chromosomal island mobilization (biorxiv.org)
Some mobile genetic elements spread among unrelated bacterial species through unknown mechanisms.
Our Search for Life in the Clouds (smithsonianmag.com)
By collecting samples after climbing a high peak and firing rockets with special traps into the upper atmosphere, scientists have found microbes living in thin air
AI cracks superbug problem in two days that took scientists years (bbc.co.uk)
A complex problem that took microbiologists a decade to get to the bottom of has been solved in just two days by a new artificial intelligence (AI) tool.
If it moves, it's probably alive: Searching for life on other planets (arstechnica.com)
The search for extraterrestrial life has always been a key motivator of space exploration. But if we were to search Mars, Titan, or the subsurface oceans of Europa or Enceladus, it seems like all we can reasonably hope to find is extremophile microbes. And microbes, just a few microns long and wide, will be difficult to identify if we’re relying on robots working with limited human supervision and without all the fancy life-detecting gear we have here on Earth.
Gut microbiota functions:metabolism of nutrients and other food components(2017) (nlm.nih.gov)
The diverse microbial community that inhabits the human gut has an extensive metabolic repertoire that is distinct from, but complements the activity of mammalian enzymes in the liver and gut mucosa and includes functions essential for host digestion.
'Obelisks', a new class of life living inside humans (bgr.com)
Researchers just discovered an entirely new class of life living inside humans
The ocean teems with networks of interconnected bacteria (quantamagazine.org)
Tiny bridges, known as bacterial nanotubes, connect the inner spaces of photosynthesizing bacteria throughout the oceans — forming little-known cellular networks of trade and communication.
The Ocean Teems with Networks of Interconnected Bacteria (quantamagazine.org)
Tiny bridges, known as bacterial nanotubes, connect the inner spaces of photosynthesizing bacteria throughout the oceans — forming little-known cellular networks of trade and communication.
The Ocean Teems with Networks of Interconnected Bacteria (quantamagazine.org)
Tiny bridges, known as bacterial nanotubes, connect the inner spaces of photosynthesizing bacteria throughout the oceans — forming little-known cellular networks of trade and communication.
Scientists Re-Create the Microbial Dance That Sparked Complex Life (quantamagazine.org)
Evolution was fueled by endosymbiosis, cellular alliances in which one microbe makes a permanent home inside another. For the first time, biologists made it happen in the lab.
'Obelisks': New class of life has been found in human digestive system (sciencealert.com)
Peering into the jungle of microbes that live within us, researchers have stumbled across what seem to be an entire new class of virus-like objects.
Viroid-like colonists of human microbiomes (biorxiv.org)
Here, we describe the “Obelisks,” a previously unrecognised class of viroid-like elements that we first identified in human gut metatranscriptomic data.
'Obelisks': New Class of Life Has Been Found in the Human Digestive Sys (sciencealert.com)
Peering into the jungle of microbes that live within us, researchers have stumbled across what seem to be an entire new class of virus-like objects.
Technical Report on Mirror Bacteria: Feasibility and Risks (purl.stanford.edu)
This report describes the technical feasibility of creating mirror bacteria and the potentially serious and wide-ranging risks that they could pose to humans, other animals, plants, and the environment.
The brain microbiome: could understanding it help prevent dementia? (theguardian.com)
Long thought to be sterile, our brains are now believed to harbour all sorts of micro-organisms, from bacteria to fungi. How big a part do they play in Alzheimer’s and similar diseases?
Bacterial World (ox.ac.uk)
Bacteria survive, thrive, fight and die by the trillion every moment. They swim using nanoscopic motors, and battle with spears. They sense, communicate, remember. And as scientists discover more about these tiny organisms, it is becoming clear that bacteria wield huge influence over us, shaping Earth’s past, our present and the future for us all. We have only recently realised how much our lives are inextricably linked with the lives of bacteria. We really are living in a bacterial world.